Real-time
Two-way sync
Changes in Atlassian or QuickBooks instantly reflect in both systems. No stale data, no manual imports.
Business productivity ⇄ Accounting and finance
Atlassian to QuickBooks integration — real-time, two-way sync
Keep Atlassian and QuickBooks in sync without custom scripts. Cut weeks of integration work, eliminate silent data drift, and give your team a single, reliable source of truth.
- SOC 2 and 6 other compliance frameworks
- POC with real engineers in minutes
Adopted by fast-scaling companies moving mission-critical data in real time
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Migrated from Celigo
Why teams connect Atlassian and QuickBooks
Connect the financial records in QuickBooks with the work happening in Atlassian, so both stay current without exports or copy-paste.
QuickBooks holds the financial truth: who the customers are, what they were billed, what they paid. Atlassian is where part of the day-to-day work happens, and that work often involves the same customers and transactions. Without a live connection, the two drift apart, and people end up answering questions from stale copies.
Stacksync keeps Bills, Vendors, Items, Accounts in QuickBooks and Jira Projects, Boards and Sprints, Issue Comments, Attachments in Atlassian in sync, bi-directionally and in real time. Whatever records Atlassian keeps and whatever events it produces, the overlap with QuickBooks is mapped field by field, and a change on either side shows up on the other within seconds.
There is no middleware to build, no API rate limits to babysit, and no nightly job that leaves the morning running on yesterday's data.
Common use cases
- Sync invoices and payments between QuickBooks and the CRM so sales sees billing status on the account record.
- Mirror the chart of accounts and journal entries into a warehouse for consolidated financial reporting.
- Sync Confluence page metadata into a knowledge index so other tools can link to current documentation.
- Mirror Jira projects into a SQL database for engineering throughput and SLA reporting.
Where Atlassian handles customer conversations: billing context in view
Front-line teams see invoice and payment status from QuickBooks next to the customer they are helping, without logging into the finance system.
Where Atlassian collects payments or triggers charges: events land in QuickBooks
Payment and charge activity flows into QuickBooks as it happens, so the books reflect reality without manual reconciliation.
Where Atlassian tracks people or companies: one identity
A customer's details updated in either system update the other, so finance and the rest of the business stop maintaining two versions of the same customer.
What you can sync between Atlassian and QuickBooks
Representative objects on each side — any object or custom field can map to any target. Schemas are auto-detected; types are converted between the two systems.
| Atlassian objects | QuickBooks objects | |
|---|---|---|
| Custom Fields Instance-specific fields (customfield IDs) that carry most business-specific data in syncs. | Credit memos Adjustments to receivables, needed for accurate revenue syncs | |
| Workflows and Statuses Status transitions mapped to stages in the paired system. | Customers Billing entities kept consistent with CRM accounts and subscription tools | |
| Users and Groups Assignees and reporters matched to identities in other tools. | Invoices Receivables created from closed deals or orders and read back for payment status | |
| Confluence Pages Documentation content readable and writable through the Confluence REST API. | Payments Received funds applied to invoices, synced for revenue reconciliation | |
| Confluence Spaces Namespaces that scope page syncs and permissions. | Bills Payables written in from procurement systems for AP processing | |
| Jira Issues The central work item, synced two-way with CRMs, support desks, and other trackers. | Vendors Supplier records aligned with purchasing and spend tools |
What ships with Atlassian ⇄ QuickBooks
Connect Atlassian and QuickBooks for flexible, real-time data sync.
Real-time sync, workflow automation, event queues, EDI, and monitoring, for every Atlassian–QuickBooks connection.
No-code + pro-code
Workflow automation
Trigger automated workflows whenever Atlassian or QuickBooks data changes, update records, fire webhooks, or kick off sequences without brittle API scripts.
At scale
Event queues
Handle millions of events per minute without losing a single Atlassian or QuickBooks record.
Observability
Monitoring
Track your Atlassian ⇄ QuickBooks sync health, view errors, and replay failed events in one click.
Trading partners
EDI
Transform legacy EDI complexity into simple database interactions between Atlassian and QuickBooks.
How the Atlassian and QuickBooks connectors work
Atlassian
- Integration surface
- REST APIs per product (Jira Cloud and Confluence Cloud)
- Authentication
- OAuth 2.0 (3LO) for apps or API tokens with basic auth for scripts
- Change detection
- Webhooks on issue and page events, plus JQL polling on the updated timestamp for backfill
- Capabilities
- read · write · webhooks
QuickBooks
- Integration surface
- REST API (QuickBooks Online)
- Authentication
- OAuth 2.0
- Change detection
- webhooks for entity change events, plus a Change Data Capture query operation for pull-based deltas
- Capabilities
- read · write · CDC · webhooks
- Rate limits
- subject to per-realm API request limits
How it works
How to connect Atlassian to QuickBooks — three steps, no code
Configure and sync within minutes, no code. Whether you sync 50k or 100M+ records, Stacksync handles the queues, infra, and plumbing. Integrations are non-invasive and need zero setup on your systems.
- 01
Connect your apps
Authenticate Atlassian and QuickBooks with each platform's native method — OAuth, API keys, or service accounts — plus secure options like SSH tunneling, IP whitelisting, and VPC peering.
Atlassian
connected
QuickBooks
connected
OAuth 2.0SSH tunnelSSL certificateVPC peering - 02
Choose tables
Pick the Atlassian and QuickBooks objects to sync — Stacksync auto-detects both schemas, including custom fields where the platform exposes them. Sync to existing tables, or let Stacksync create new ones with ideal data types.
objects · Atlassian ⇄ QuickBooksCustomers 12,480Sales Orders 8,213Invoices 5,902Items 1,344 - 03
Map fields
Fields map automatically even when names and types differ. Stacksync handles transformation and type casting for you, zero configuration required.
Atlassian QuickBooksCompany company_name textEmail email textAmount amount numericCreated created_at timestamp
FAQ
Atlassian and QuickBooks integration FAQ
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Yes. Stacksync provides a managed, real-time two-way integration between Atlassian and QuickBooks: authenticate both systems, choose the objects to sync (such as Atlassian's Custom Fields and Workflows and Statuses), map fields visually, and changes propagate both ways in milliseconds — no code required.
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QuickBooks: Updates must include the record's current SyncToken; stale tokens are rejected, giving built-in optimistic concurrency control. Atlassian: Jira custom fields are identified by instance-specific IDs (customfield_XXXXX), so field mappings must be discovered per site rather than hard-coded. Stacksync's field mapping accounts for these differences between Atlassian and QuickBooks without custom code.
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Stacksync is SOC 2 Type II and ISO 27001 certified with HIPAA BAA support. Data is encrypted in transit, and a zero-persistent-storage architecture means Atlassian and QuickBooks records are not retained after a sync operation.
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Stacksync pricing is usage-based and starts at $1,000/month, including the managed Atlassian and QuickBooks connectors, real-time two-way sync, monitoring, and support. That replaces building and maintaining a custom Atlassian–QuickBooks integration in-house.
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Yes — Stacksync ships production-grade connectors for both Atlassian and QuickBooks. The connectors handle authentication, schema detection, rate limits, and retries; you configure the sync, and Stacksync operates it.
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Change detection on Atlassian: Webhooks on issue and page events, plus JQL polling on the updated timestamp for backfill. On QuickBooks: Webhooks for entity change events, plus a Change Data Capture query operation for pull-based deltas. Each detected change propagates to the other side in milliseconds, with field-level conflict resolution and an inspectable event log.
SECURITY
Security teams love Stacksync
As a data company, we understand the importance of keeping your data secure. Stacksync is built with security best practices to keep your data safe at every layer, and is DPF-certified for US, EU, UK and CH data transfers.
SOC 2 type II
ISO 27001
HIPAA BAA
GDPR
CCPA
CSA STAR
DPF US-EU-UK-CH
→ SECURITY WITH BENEFITS
SSO & SCIM
Let your users access Stacksync from your centralized user management systems. Works with Okta, Azure, Google SSO and more.
Alerts
Immediately get alerted about record syncing issues over email, Slack, PagerDuty and WhatsApp. Resolve issues from a centralized dashboard with retry and revert options.
Secure connection options
Securely connects to your systems with:
Related integrations
Every pair below is a real-time, two-way sync. Search all 386 integrations available for Atlassian and QuickBooks.
Popular · 8 of 386
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Atlassian ⇄ Pigment -
Atlassian ⇄ Stripe -
Atlassian ⇄ Rillet -
Atlassian ⇄ Workday -
QuickBooks ⇄ Amazon Seller Central -
QuickBooks ⇄ SendGrid -
QuickBooks ⇄ Twilio -
QuickBooks ⇄ GitHub
No integrations match .
