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Business productivity ⇄ Database

Atlassian to MarkLogic integration — real-time, two-way sync

Keep Atlassian and MarkLogic in sync without custom scripts. Cut weeks of integration work, eliminate silent data drift, and give your team a single, reliable source of truth.

  • SOC 2 and 6 other compliance frameworks
  • POC with real engineers in minutes

Adopted by fast-scaling companies moving mission-critical data in real time

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Why teams connect Atlassian and MarkLogic

Mirror Atlassian's data into MarkLogic so your own code can read and write it like any other table, with changes flowing both ways in seconds.

Engineers integrate with tools like Atlassian through APIs, which means auth, pagination, rate limits, webhooks, and retry logic, all maintained forever and all different for every tool. Meanwhile the data would be trivial to use if it simply lived in MarkLogic.

Stacksync mirrors Confluence Spaces, Jira Issues, Jira Projects, Boards and Sprints from Atlassian into Users & Roles, Documents, Collections, Semantic Triples in MarkLogic and keeps both sides in sync in real time. Your services query the database directly, and inserts or updates your code makes flow back into Atlassian, so the tool and the database never disagree.

Common use cases

  • Create Jira issues from records in other systems, such as onboarding tasks generated from a closed-won CRM deal.
  • Keep Jira and a second tracker (for example a customer's Jira instance) aligned during co-delivery projects.
  • Feed harmonized entities into search and analytics applications as documents change.
  • Sync curated master data from a MarkLogic data hub into operational CRMs and ERPs.

Read Atlassian with a query

Records from Atlassian are ordinary rows in MarkLogic; join them, index them, and use them in application logic without touching the vendor API.

Automate Atlassian from your codebase

Write to the synced tables in MarkLogic and Stacksync propagates the change into Atlassian, replacing custom integration code.

React to changes as they happen

Updates in Atlassian arrive as row changes in MarkLogic, so triggers, jobs, and services can respond in near real time.

What you can sync between Atlassian and MarkLogic

Representative objects on each side — any object or custom field can map to any target. Schemas are auto-detected; types are converted between the two systems.

Atlassian objects MarkLogic objects
Attachments Files on issues mirrored to paired records where needed. Databases & Forests Storage units that define the scope and placement of synced content.
Custom Fields Instance-specific fields (customfield IDs) that carry most business-specific data in syncs. Users & Roles Security principals that govern what an integration credential can read or write.
Workflows and Statuses Status transitions mapped to stages in the paired system. Documents JSON and XML documents, the primary records read from and written to the database.
Users and Groups Assignees and reporters matched to identities in other tools. Collections Named groupings used to scope which documents a sync reads or updates.
Confluence Pages Documentation content readable and writable through the Confluence REST API. Semantic Triples RDF data stored alongside documents, queryable with SPARQL for linked-data syncs.
Confluence Spaces Namespaces that scope page syncs and permissions. TDE Views Relational projections of documents that let syncs read document data as SQL rows.
What ships with Atlassian ⇄ MarkLogic

Connect Atlassian and MarkLogic for flexible, real-time data sync.

Real-time sync, workflow automation, event queues, EDI, and monitoring, for every Atlassian–MarkLogic connection.

Real-time

Two-way sync

Changes in Atlassian or MarkLogic instantly reflect in both systems. No stale data, no manual imports.

No-code + pro-code

Workflow automation

Trigger automated workflows whenever Atlassian or MarkLogic data changes, update records, fire webhooks, or kick off sequences without brittle API scripts.

At scale

Event queues

Handle millions of events per minute without losing a single Atlassian or MarkLogic record.

Observability

Monitoring

Track your Atlassian ⇄ MarkLogic sync health, view errors, and replay failed events in one click.

Trading partners

EDI

Transform legacy EDI complexity into simple database interactions between Atlassian and MarkLogic.

How the Atlassian and MarkLogic connectors work

Atlassian

Integration surface
REST APIs per product (Jira Cloud and Confluence Cloud)
Authentication
OAuth 2.0 (3LO) for apps or API tokens with basic auth for scripts
Change detection
Webhooks on issue and page events, plus JQL polling on the updated timestamp for backfill
Capabilities
read · write · webhooks

MarkLogic

Integration surface
REST API (Client API), plus SQL/ODBC access over TDE views and Java/Node client libraries
Authentication
Username/password (digest or basic), with certificate-based options
Change detection
No exposed transaction log; polling on document timestamps/metadata, or server-side triggers that record changes for pickup
Capabilities
read · write
How it works

How to connect Atlassian to MarkLogic — three steps, no code

Configure and sync within minutes, no code. Whether you sync 50k or 100M+ records, Stacksync handles the queues, infra, and plumbing. Integrations are non-invasive and need zero setup on your systems.

  1. 01

    Connect your apps

    Authenticate Atlassian and MarkLogic with each platform's native method — OAuth, API keys, or service accounts — plus secure options like SSH tunneling, IP whitelisting, and VPC peering.

    • OAuth 2.0
    • SSH tunnel
    • VPC peering
    Atlassian connected
    MarkLogic connected
    OAuth 2.0
    SSH tunnel
    SSL certificate
    VPC peering
  2. 02

    Choose tables

    Pick the Atlassian and MarkLogic objects to sync — Stacksync auto-detects both schemas, including custom fields where the platform exposes them. Sync to existing tables, or let Stacksync create new ones with ideal data types.

    • Standard objects
    • Custom objects
    • Auto-schema
    objects · Atlassian ⇄ MarkLogic
    Customers 12,480
    Sales Orders 8,213
    Invoices 5,902
    Items 1,344
  3. 03

    Map fields

    Fields map automatically even when names and types differ. Stacksync handles transformation and type casting for you, zero configuration required.

    • Auto-map
    • Type casting
    • Transforms
    Atlassian MarkLogic
    Company company_name text
    Email email text
    Amount amount numeric
    Created created_at timestamp
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FAQ

Atlassian and MarkLogic integration FAQ

SECURITY

Security teams love Stacksync

As a data company, we understand the importance of keeping your data secure. Stacksync is built with security best practices to keep your data safe at every layer, and is DPF-certified for US, EU, UK and CH data transfers.

Learn more about security
SOC 2 type II
ISO 27001
HIPAA BAA
GDPR
CCPA
CSA STAR
DPF US-EU-UK-CH
→ SECURITY WITH BENEFITS

SSO & SCIM

Let your users access Stacksync from your centralized user management systems. Works with Okta, Azure, Google SSO and more.

Alerts

Immediately get alerted about record syncing issues over email, Slack, PagerDuty and WhatsApp. Resolve issues from a centralized dashboard with retry and revert options.

Secure connection options

Securely connects to your systems with:

OAuth 2 SSH Tunnelling SSL certificates IP Whitelisting VPN gateway VPC peering and more

Related integrations

Every pair below is a real-time, two-way sync. Search all 386 integrations available for Atlassian and MarkLogic.

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